BIOL 202 Lecture Notes - Lecture 8: Lysine, Arginine, Tata Box

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carminebuffalo36

31 May 2016

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Two modes of transcription regulation: positive and negative control. Positive regulation activators binding to activator binding site upstream of the promoter which upregulates transcription. Negative regulation repressors binding to operator which is downstream of the promoter and serves to repress transcription and block gene expression. The default state = low basal level of transcription; so the above modulate that. These regulator proteins are genetic sensors allosteric regulation of transcriptional activators/repressors. Their conformational ability to bind to dna or not is determined by effectors. So for lac operon, effector is lactose; lac operon is a repressible system. So presence of lactose binding to repressor protein product of lac i gene prohibits the repressor protein from binding to dna and repress transcription. Effector makes the activator activate gene expression and makes repressor protein not repress so the end result is the same.

Related Questions

1.) What type of control best describes the lac operon when it is regulated by allolactose? Explain the features of this type of regulation using the lac operon as an example.

2.) What is positive gene regulation?

a) when an activator protein binds to the operator of a gene to turn expression off

b) when a repressor protein binds to the operator of a gene to turn expression off

c) when an activator protein binds to the operator of a gene to turn expression on

d) when a repressor protein binds to the operator of a gene to turn expression on

e) when a protein binds to DNA to change gene expression

3.) In the lactose operon of E. coli, what is the function of each of the following genes or sites: a) regulator, b) operator, c) promoter, d) structural gene Z and e) structural gene Y?

a) regulator gene

b) operator

c) promoter

d) structural gene Z

e) structural gene Y

4.) In a negative, repressible regulatory mechanism, transcription of the structural gene(s) occurs in

a) the presence of the co-repressor, but not in its absence.

b) the absence of the co-repressor, but not in its presence.

c) the presence of the inducer, but not in its absence.

d) the absence of the inducer but not in its presence.

e) the absence or presence of the co-repressor.

What are answers and can you explain them to me?

When (glucose, lactose) ___________ levels inside a bacterial cell are low, cyclicAMP levels are (high, low) __________. This is because metabolizes sugars (activate, inhibit) ___________ the enzyme adenylate cyclase, and (activate, inhibit) __________ the enzyme cAMP phosphodiesterase, causing cyclic AMP levels to rise. Consequently, the CAP protein is (Activated, inhibited, unaffected) ___________ by the cyclic AMP and binds to the lac promoter region, and the CAP protein acts like a sigma factor recruiting (DNA, RNA) ___________ polymerase to the promoter. This establishes condition that may lead to the (transcription, replication) __________ of the lac operon if (allolactose, glucose, lactose) _____________ is available to bind to (lac repressor, lacZ, lacY, lacA) _________ protein keeping this protein from binding to the (lacO, lacZ. lacY, lacA) ___________ gene.

yellowwasp623

1. What is the term when the product of a biochemical pathway inhibits the activity of the first enzyme of a pathway?

		feedback inhibition.
		activator inhibition.
		diffusional regulation.
		enzyme activation.

2. Through control of gene expression, prokaryotes respond to changing __________ conditions.

		internal
		protein
		environmental
		genetic

3. A protein that negatively regulates transcription by binding to the operator is known as the

		operon
		repressor
		activator
		inducer

4. During attenutation, when tryptophan levels are high, the ________ stem-loop forms and transcription ________ the trpL gene.

		1-2, ends just past
		3-4, ends just past
		1-2, continues beyond
		3-4, continues beyond

5. The process of turning on the expression of a gene in response to a substance in the environment is called:

		constituation.
		repression.
		induction.
		catabolism.

6. What is a function of some specific transcription factors?

		to bind to the promoter region of the gene to facilitate the proper alignment of the RNA polymerase
		to bind to the centromere to induce meiosis
		to bind to enhancer regions to help regulate gene transcription
		to bind to the operator to recruit sigma factor

7. How does exposing an E.coli cell to glucose affect the regulation of the lac operon via CAP?

		cAMP binds to CAP and transcription is increased.
		cAMP binds to CAP and transcription is decreased.
		cAMP does not bind to CAP and transcription is increased.
		cAMP does not bind to CAP and transcription is decreased.

8. The lac repressor protein works when mutations in the repressor gene and structural genes are:

		in cis or in trans.
		in trans only.
		in cis only.
		in both prokaryotes and eukaryotes.

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BIOL 202 Lecture Notes - Lecture 8: Lysine, Arginine, Tata Box

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