BIOL 300 Lecture Notes - Gtpase, Bound 2, Guanine
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Now, we have isolated the ligand and the receptor, but we want to know how well they are able to bind to one another, i. e. the affinity. A ligand-receptor association is normally a non-covalent interaction (through h bonds, ionic, etc. Nonetheless, it can be treated as an equilibrium reaction with the receptor and ligand as the reactants, and the receptor-ligand complex as the product. How do we measure the dissociation constant experimentally upon isolation of a receptor and its ligand: you don"t necessarily have all of the concentrations needed to calculate it. You usually start out with the concentration of the ligand, which you purified; in this example, we"ll talk about insulin, which binds to an insulin receptor: you can vary this concentration to your liking. You can then add this insulin to cells; you know the number of cells in your colony by counting them.