BIOL 1541L Lecture Notes - Lecture 16: Polymerase Chain Reaction, Genetically Modified Bacterium, Silicon Carbide

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jadecheetah992

28 Mar 2017

School

University of Arkansas

Department

Biology

Course

BIOL 1541L

Professor

John Shadwick

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Document Summary

26. 1 dna technology: genome: complete genetic make up of an organism, can clone genes and use them to alter the genome of viruses and cells. Genetic engineering: innumberable uses, from producing a product to treating cancer and genetic disorders. 26. 2 biotechnology products: genetically modi ed organisms (gmo"s): transgenic bacteria, plants, and animals are called this. Transgenic plants: techniques have been developed to introduce foreign genes into immature plant embryos or into plant cells called protoplasts that have had their cell wall removed. Its possible to treat protoplasts with an electric current while they are suspended in a liquid containing foreign dna. 26. 3 gene therapy: gene therapy: the insertion of genetic material into human cells for treatment of genetic disorders and various human illnesses, example: cardiovascular disease, and cancer. Testing for genetic disorders: testing the dna, testing for a genetic marker is similar to the traditional procedure for dna.

Related Questions

Question: Think about these questions, and post your thoughts on the use of cloning. Specifically, think the about the use of human cloning and discuss the potential impact on society.

Background Discussion: The scientific research terms, cloning means making exact copies of genes, a cell, or an organism. Therefore, cloning has been around for a long time. Identical twins are clones of a single zygote. When a single bacterium reproduces asexually on a petri dish, a colony of cells results, and each member of the colony is a clone of the original cell. Through biotechnology, bacteria now produce clone copies of human genes.

Through recent advances in science, it is possible to produce a clone of a mammal- and perhaps even one day, a human. The parent need not contribute sperm or egg to the process. During the so-called reproductive cloning, a nucleus (which contains the genetic material of a person) from one adult cell is placed in an enucleated egg. That egg is then allowed to develop. The developing embryo is placed in the uterus of a surrogate mother, and when birth occurs, the clone is an exact genetic copy of the original parent (of course the clone is younger). The process of cloning whole animals, and certainly humans, has not been perfected. Until it is, therapeutic cloning is more likely to become widespread.

Suppose it were possible to put the nucleus from a cell of a burn victim into an enucleated egg that is forced to become skin cells in the laboratory. These cells could be used to provide grafts of new skin that would not be rejected by the recipient. Would this be a proper use of cloning in humans?

Now, suppose parents want to produce a child free of genetic diseases. Scientists produce an embryo though in vitro fertilization, and then they clone the embryo to produce several embryos. Genetic engineering is then used to remove the genetic defect, and the defect free embryos are implanted into the uterus of a surrogate where they are allowed to grow to term. Would this be proper use of cloning in humans?

What if later scientists were able to produce children with increased intelligence or athletic abilities using the same technique? Would this be an acceptable use of cloning in humans?

Recombinant DNA Technology

The questions all relate to the same topic and somewhat interrelate

1. Plasmids used in vitro to clone foreign DNA fragments are called ___

A. Transgenic.

B. Clones.

C. Vectors.

D. Conjugants.

2. VNTR alleles are hypervariable regions of human DNA that differ from each other in:

A. Location of internal sites recognized by restriction enzymes.

B. Variable number of point mutations.

C. Number of copies of an internally repeated DNA sequence.

D. Variable location on different chromosomes.

3. Probability calculations are used in forensic applications of DNA fingerprinting to determine if:

A. DNA from two different sources has matching alleles.

B. DNA samples were degraded before analysis.

C. A match between alleles of different DNA samples might have occurred by chance.

D. An unknown DNA sample is from a male or a female.

4. Plasmid vectors used in cloning often contain a gene for the N-terminal 146 amino acids of the enzyme Î²-galactosidase. What is the purpose of including this gene in the vector?

A. It allows selection of E. coli host cells that contain the plasmid.

B. It allows selection of E. coli host cells that contain plasmid in which the insert has been ligated.

C. It cleaves the insert to allow it to be ligated into the vector.

D. It enables the plasmid vector to replicate in E. coli host cells.

5.The first gene therapy clinical trial took place in 1990, on patients with SCID (severe combined immunodeficiency syndrome). Is this true or false?

A. True

B. False

copperferret659

View/perform/read ALL THREE of the following prior to answeringthe questions.

http://highered.mcgraw-hill.com/olcweb/cgi/pluginpop.cgi?it=swf::535::535::/sites/dl/free/0072437316/120078/micro10.swf::Stepsin Cloning a Gene (Links to an external site.)

http://www.discoverbiotech.com/wiki/-/wiki/Main/Applications ofCloning (Links to an external site.)

http://www.wiley.com/college/boyer/0470003790/animations/cloning/cloning.htm(Links to an external site.)

Skip to question text.

From the list below, which of the following is the most logicalsequence of steps for splicing foreign DNA into a plasmid andinserting the plasmid into a bacterium?
I. Transformbacteria with recombinant DNA molecule
II. Cutthe plasmid DNA using restriction enzymes
III. Extractplasmid DNA from bacterial cells
IV. Hydrogen-bondthe plasmid DNA to nonplasmid DNA fragments
V. Useligase to seal plasmid DNA to nonplasmid DNA

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Plasmids (or vectors) are important in biotechnology becausethey are

a vehicle for the insertion of recombinant DNA intobacteria.

surfaces for respiratory processes in bacteria.

recognition sites on recombinant DNA strands.

surfaces for protein synthesis in eukaryotic recombinants.

proviruses incorporated into the host DNA

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Plasmids are put into bacterial cells by

restriction enzymes

DNA ligase

binding of cohesive sticky ends

transformation

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Restriction enzymes usually

cut donor DNA evenly so smooth edges result

cut donor DNA but do not affect plasmids

make staggered cuts at specific sequences in DNA in both donorDNA and plasmid

are used in ligating plasmids into bacterial host cells

more than one of the above

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After combining DNA fragments in a cloning experiment, ___ isused to covalently join the DNA segments.

Restriction enzyme

DNA Ligase

Reverse transcriptase

DNA polymerase

Helicase

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It is theoretically possible for a gene from any organism tofunction in any other organism. Why is this possible?

All organisms have ribosomes.

All organisms have the same genetic code.

All organisms are made up of cells.

All organisms have similar nuclei.

All organisms have transfer RNA.

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Skip to question text.

Assume that you are trying to insert a gene into a plasmid andsomeone gives you a DNA sample cut with restriction enzyme X. Thegene you wish to insert from the given sample has sites on bothends for cutting by restriction enzyme Y. You have a plasmid with asingle site for Y, but not for X. Your strategy should be to

cut the plasmid with restriction enzyme X and insert thefragments cut with Y into the plasmid.

cut the plasmid with enzyme X and then insert the gene into theplasmid.

cut the DNA again with restriction enzyme Y and insert thesefragments into the plasmid cut with the same enzyme.

cut the plasmid twice with restriction enzyme Y and ligate thetwo fragments onto the ends of the human DNA fragments cut withrestriction enzyme X.

insert the fragments cut with X directly into the plasmidwithout cutting the plasmid.

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Which of the following is/are false in regard to expressionplasmids (also called expression vectors)?

They are used to make proteins using a cloned gene.

They contain a promotor.

They are the first plasmid type used to clone a gene.

They contain a terminator.

More than one of the above is false.

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What is NOT a potential problem(s) associated with usingbacteria containing a cloned eukaryotic gene (e.g. a human gene) toproduce a functional protein?

If the eukaryotic gene contains introns the bacteria will notremove them and the resulting amino acid sequence will be differentthat that made by a eukaryote.

The bacteria may not fold the protein correctly.

The bacteria may degrade the protein.

All of the above are potential problems.

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Cloning allows for production of proteins in much larger amountsthan occurs in the cells from which the gene is isolated.

True

False

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Question 111 pts

Gene cloning is used to do all of the following except

Make insulin

Making genetically identical animals (e.g. Dolly thesheep)

Make vaccines

Perform Gene Therapy

Making genetically engineered plants

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BIOL 1541L Lecture Notes - Lecture 16: Polymerase Chain Reaction, Genetically Modified Bacterium, Silicon Carbide

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