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Midterm

BIOL 1070 Midterm 1 notes

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Department
Biology
Course
BIOL 1070
Professor
Wright& Newmaster
Semester
Fall

Description
BIOL 1070 Midterm 1 Unit 1 ­ Online InvasiveSpecies • Thewater hasbecomemuchclearer asthequantity of particulatematter in thewater column hasbeengreatly reduced.This is oneof thebyproductsof thehugeabundanceof zebramussels, whosefilter-feeding activities cycle massiveamountsof water every day. • Zebramusslesareableto attachto just about any solid surfacehasmadethemareal menaceasthey clog pipes andcover industrial equipment, docks, andboats. • It hasbeenestimatedthat theeconomic damageby zebramusselsandtheefforts to control themhavealready cost billionsof dollars Herearethequestionsabout zebramusselsthat struck measbeing important: o Wheredid zebramusselscomefrom? o Whenandwheredid they first arrive, andhow havethey spreadsoquickly? o What impactsarethey having onthenative faunaandecosystem? o Why havethey beensosuccessful atspreading into new lakesandrivers? Peer-reviewed scientific publications, also known as the “primary literature” are the means by which scientists share their results with other researchers. As members of the University of Guelph, you have access to an extraordinary number of peer-reviewed journals through the library, most of them with electronic access. Search engines such as Google Scholar, PubMed, and Web of Science can all be used to locate papers on any topic. Zebra Mussels • Thezebramussel (Dreissenapolymorpha) is native to eastern Eurasia, specifically theBlack Seaand CaspianSea. • Modeof transport acrosstheAtlantic wasin theballast water of anoceanliner. • First reportedin NorthAmericain 1988in LakeSt. Clair, in apeer-reviewedpaper by Hebert etal. (1989). o Prof. Hebert is theDirector of theBiodiversity Instituteof Ontario hereat theUniversity of Guelph. • This is not thefirst timethezebramussel hasinvadednewenvironments— it alsoinvadedwestern Europe in thelate1700sandearly 1800s • Therehassincebeenasecondinvasion by arelatedmussel, thequaggamussel (Dreissenarostriformis) NativeMusselFauna In Ontario, thenative musselsareall membersof thefamily Unionidae, but within thisthereareseveral distantly relatedsubfamilies. Zebramusselsandother factors(especially agricultural practices) arehaving asignificant impact onthenative musselsof theregion. Freshwater musselsareamongthemost endangeredorganismsin NorthAmerica. Unionidsareparticularly interesting becauseof their complex life cycle, which includesacomponent of obligate parasitism (i.e., they must parasitizeahost atsomestageto completetheir reproductive cycle). Most of thespeciesin Ontario aredioecious(“two houses”), meaning that they haveseparatemalesandfemales. o Malesreleasetheir sperm into thewater through their exhalant siphon, which arethentakenupby females downstreamthrough their inhalant siphon. Fertilization is internal (i.e., insidethefemale’sbody), andthe embryosdevelop insidemodified pouchesof thefemale’s gills called amarsupium. o Theembryosmatureinto specializedlarvaecalled glochidia (singular glochidium), andit is thesethat represent theparasitic life stage. o Glochidia must attachto thegills of afish in order to continuetheir development. o Themantle tissueactsasa“lure” that resemblesafish or invertebrateprey that attractsthehost. Key Pointsin Unit 1 1. Theinvasivezebramussel (Dreissenapolymorpha) hashadanenormouseconomic, aesthetic, andbiological impact ontheGreat Lakeswatershed. It originatedfrom eastern Eurasiaandis thought to havebeentransportedby anoceanvessel sometimebefore1988. 2. Peer-reviewedprimary literatureis thestandard meansby which scientistssharetheir researchfindings. It is typically awell regulatedsystemwheretwo or moreexternal refereesreadandcritiquethemanuscript providing a recommendation to thejournal editor to publish or reject thestudy. 3. Thereare41native freshwater musselsin Ontario, many of themareendangered. Unionidsareobligateparasites whereglochidia (larvae) arereleasedandmust attachto thegills of afish host to completetheir development. 4. Native andinvasive mussel speciesarestudiedby avariety of different people: undergraduates,graduates, professorsandgovernment scientists. Thesepeopleexploremussel diversity, adaptations, distribution, phylogeneticsandconservation issues. Unit 2–Online Taxonomic Level: Domains–eukaryotes Kingdoms–Animilia (animals) Phyla (singular: Phylum) - Mollusca(mollusks) Classes–Mammilia (mammals) Orders–Primates(apes) Families-Hominidae(great apes) Genera(singular: Genus) - Homo(humansandextinct relatives, e.g., Neanderthals) Species(singular is alsospecies, not specie) - sapiens(humans) Biologistsusetheword “diversity” to refer to thenumber of speciesin ataxonomic groupor ageographical area. DifferencesWithin Species: Sexual Dimorphism andAge Eachspecieshasmorphological (physical) traitsthat canbeusedto distinguishit from other mussels. Our development — what biologistscall “ontogeny” — involvessignificant changesin morphology from youth to old age.This is alsotrueof mussels! Like humans,musselsmay exhibit clear differencesamongindividualswithin speciesdueto sexual dimorphism (in somespecies) andage.Finding gravid femalesandjuvenilesis agood sign that recruitment (production of thenext generation) is succeeding Femalemusselshaveawider posterior while malescometo apoint. DifferencesWithin SpeciesII: Morphology Thescientific nameconveysimportant information about thespeciesitself- .Dreissenapolymorpha(zebra mussel), is onesuchexample: “polymorpha” means“many forms”. DifferencesWithin Species: Cryptic Variation To beevolutionarily relevant, variation amongindividualsmust beheritable. In other words, theremust beagenetic basisfor theobservedtrait suchthat it will bepassedonin similar form to offspring. Casesin which thesameset of genes(genotype) canresult in differing features(phenotype) according to environmental conditionsareknown as“phenotypic plasticity”. Abundancevs.Variation vs. Diversity vs. Disparity Morphological and genetic variation (differencesamong individuals within aspecies) diversity (number of species) Whereasdiversity is ameasureof thenumber of different species,disparity refersto how physically different those speciesarefrom eachother. We areall Related You areamember of alineageof ancestorsanddescendantsthat hasnever oncebeenbrokenin morethan3.8 billion yearsof life onEarth. Waysin which living thingsarerelatedto oneanother through their commonancestors: afield known as “phylogenetics”. Anatomy OfAPhylogeny Theclosest relativesdescendedfrom asingle recent ancestor areeven called “sister taxa” — again, thereareimportant parallels between phylogeniesandpedigrees. This order of branching, what biologistscall “topology”, reflectsthe ancestor-descendant relationships, andthat is themost important information containedin atreediagram. Theancestorsanddescendantsonaphylogeny areusually species. Theroot (commonancestor sharedby all speciesdepicted), branches (connectionsbetweenancestorsanddescendants), and“tips” (or “terminal nodes”). Theterminal nodesusually represent living species, whereasinternal nodesareusually extinct ancestors. Evolutionary Classification Theapproachto classification that is basedstrictly onevolutionary relationshipsis known as“cladistics”, andtheevolutionary groupsthat it considersworthy of naming arecalled “clades”. A cladeis any groupof speciesthat includesthelast ancestor that they sharedandall its descendants. Valid clades,which includethelast sharedancestor andall its descendants, areknown as“monophyletic” groups (meaning “onelineage”). Whenoneof thedescendantsis left out, which createswhat cladistscall a“paraphyletic” group. For example, the term “reptile”, which includeslizards, snakes,turtles, andcrocodilesbut not birdsis aparaphyletic group. It is not a clade,becauseit leavesout birds. Mussles Musselsinhabiting fast-moving riversexhibit avariety of adaptationsto remaining anchoredin thesubstrateatthe bottom. This includesvariousconfigurationsof bumps, ridges,or wings. This sort of featurehasevolved morethanoncein independent lineagesasasimilar adaptation under similar environmental pressures,aprocessknown as“convergent evolution”. Sharing ancestral traits is called “homology”, whereashaving traits that aresimilar but evolved independently is called “homoplasy” (convergent evolution). Unit 3–Online Adaptation andSpecialization Mutation (theorigin of newgenetic variation) Genetic drift (changesdueto chance, specifically founder effectsandpopulation bottlenecks) Geneflow (movement of genesamongpopulations) Natural selection: Non-randomdifferencesin survival and/or reproduction amongindividual entitiesonthebasisof differencesin heritablecharacteristics. Adaptation: 1) acharacteristic that enhancesthesurvival and/or reproduction of organismsthat bearit, relative to alternative (especially ancestral) character states; 2) aphysical, physiological, behavioural, or other characteristic evolved through natural selection.Adaptation is NOT thechangeundergoneby anindividual organismduring its lifetimein responseto external conditions. Population: for sexual species, agroupof interbreeding individualsandtheir offspring. Alleles: alternate(i.e., different andmutually exclusive) formsof agene.e.g., “B” (brown eyes)versus“b” (blue eyes). Genotype: thesetof genespossessedby anorganism. Phenotype: thephysical expression of thegenotype(in combination with theenvironment). Frequency: theproportional representation of aphenotype, genotype, gamete,or allelein apopulation. e.g., 6out of 10haveblueeyes= 60% = afrequency of 0.6. The BasisOf Natural Selection Whenit comesspecifically to adaptive changesamongspeciesandthetraitsof organismsthat allow themto survive successfully in their environments, natural selection is indeedtheonly known mechanismthat canprovidea scientific explanation. 1. Individualswithin populationsarevariable. That not every individual is identical in apopulation is obviousfor humans 2.This variability amongindividuals is atleast partly heritable. Offspring tend to look morelike their parentsthanlike unrelatedmembersof thepopulation 3. Not everyonesurvivesandreproduces,andsomeindividualsaremoresuccessful thanothers. Many moreoffspring areproducedin eachgeneration thancould possibly survive, aphenomenonknown as “overproduction”. 4.Thedifferential survival andreproduction of individuals is associatedwith theheritablevariation among individuals (i.e., it is non-random). This is thekey to natural selection, that theindividuals who domanageto reachadulthoodandhaveoffspring of their own are, onaverage,better suitedto surviving andreproducing in their particular environment becauseof traits that they inherited from their parents. 10Thingsabout Natural Selection 1. Natural selection by itself does not create new traits, it only changes the proportion of variation that is already present in the  population. Most often, natural selection reduces the amount of variation in a population because some variants are eliminated. 2. Mutation, not natural selection, is the source of new variation. The repeated two­step interaction of mutation and natural  selection is what leads to the evolution of new adaptive features. 3. Mutation is random with respect to fitness — that is, it occurs without regard for what happens to the organism. It is simply a  genetic error. Natural selection is, by definition, non­random with respect to fitness. This means that, ove
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