BIOL308 Study Guide - Final Guide: 23S Ribosomal Rna, Transferase, Ribonuclease

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mauvelion470

11 Jan 2015

School

University of Waterloo

Department

Biology

Course

BIOL308

Professor

Dragana Miskovic

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Document Summary

Some rna molecules can self-splice introns out, or act in snrnps as the catalytic units of spliceosomes to remove introns. Rnase p is another example of a ribozymes that removes the 5" tail of a trna following transcription. A peptidyl transferase is an enzyme that catalyzes the transfer of an amino acid from a trna to a growing peptide chain, and catalyzes the peptide bond between two amino acids. Multiple aug codons allows for potentially different proteins to be produced from the same transcript. Internal ribosomal entry sites, which can be controlled under different circumstances, can allow ribosomes to bind downstream of the 5" cap and transcribe from different coding sequences. Translational factors such as eif2 can be phosphorylated, affecting their activity. Pabii is the nucleus version of pabi, and has a role to stabilize the mrna while in the nucleus, preventing it from degradation, and speeding up the process of polyadenylation: explain what happens with polypeptides after translation.

Related Questions

Gene ExpressionQuestions

Question 1

#1) Match the following reactions to the correct step of proteinsynthesis by ribosomes.

___ Hydrolysis of GTP and disassembly of the translationcomplex.

___ binding of initiator aminoacyl-tRNA

___ formation of the peptide bond

___ translocation of ribosome

___ Use of 2 mole-equivalents of ATP and attachment of an aminoacid to a transfer RNA molecule

Answer Choices for Number #1
A. initiation step
B. elongation step
C. termination step
D. aminoacyl-tRNA synthetase reaction

Question 2

#2) Mark which of the following are needed for the synthesis ofRNA by RNA polymerase:

___ primer

___ ATP, CTP, GTP, UTP

___ dATP, dCTP, dGTP, dTTP

___ template

Question 3

#3) Mark which of the following are properties of a bacteria(prokaryotic) messenger RNA:

___		It has a cap at the 5'-end.
___		It has a poly-A tail at the 3'-end.
___		It has a 5'-untranslated region (UTR).
___		It has a 3'-untranslated (UTR) region.

Question 4

#4) Match the following RNA molecules to their respectivefunctions in the cell.

___ transfer RNA

___ ribosomal RNA

___ messenger RNA

___ small nuclear RNA (snRNA)

Answer Choices for Number #4

A. This RNA serves as the template for protein synthesis.
B. This molecule is a molecular component of ribosomes.
C. This molecule is a component of spliceosomes and serves torecognize the exon-intron junctions
D. This RNA molecule is delivers the amino acid to the ribosome andit recognizes the appropriate codons with its anticodon loop.

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The function of tRNA is to

Select one:

a. provide a site for polypeptide synthesis

b. transport amino acids to the ribosome

c. transcribe DNA

d. transform DNA

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The lipid bi-layer is

Select one:

a. hydrophilic

b. hydrophobic

c. hydrophilic and hydrophobic

d. depends on the surrounding medium

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Which of the following statements is FALSE?

Select one:

a. carbohydrates are generally hydrophilic molecules.

b. living things use carbohydrates for structure and for energy storage.

c. carbohydrates are composed principally of carbon, hydrogen, and oxygen.

d. none of the above â they are all true

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Which of the following terms correctly describes a compound featuring more than one double bond?

Select one:

a. saturated

b. polyunsaturated

c. monounsaturated

d. disaturated

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Eukaryotic mRNA transcripts are protected from modification by

Select one:

a. 5' caps

b. 5' poly-A caps

c. 3' caps

d. 5'-3' poly tails

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The methods of membrane transport that don't require protein channels or carriers are

Select one:

a. osmosis

b. diffusion

c. phagocytosis

d. exocytosis

e. all of the above

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Complete the following sentences: "Primary active transport is dependent on __________. Secondary active transport is dependent on __________ created by __________.

Select one:

a. channel proteins, electrochemical gradient, carrier proteins

b. electrochemical gradient, ATP, mitochondria

c. electrochemical gradient, ATP, primary active transport

d. ATP, electrochemical gradient, primary active transport

e. carrier proteins, electrochemical gradient, channel protein

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Which of the following is a reduced compound?

Select one:

a. CO2

b. O2

c. N2

d. NAD +

e. NADH

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Gel electrophoresis separates DNA fragments according to their:

Select one:

a. base sequence

b. size

c. percentage of labelled nucleotides

d. electrical charge

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G0 is:

Select one:

a. part of interphase

b. the phase of the cell cycle where DNA replication occurs

c. the phase of the cell cycle where two identical daughter cells are created

d. a special "resting" phase in which cells are in a non cycling state

e. a special phase where the number of chromosomes in a parent cell is reduced by half such that each daughter cell contains only one member of a pair of homologous chromosomes

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At which pH will the concentration of hydrogen ions be equal to the concentration of hydroxide ions?

Select one:

a. pH 1

b. pH 5

c. pH 7

d. pH 9

e. pH 14

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Which of the following enzymes has proofreading activity?

Select one:

a. Ligase

b. Helicase

c. Topoisomerase

d. DNA polymerase

e. Peptidyl transferase

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The process of _______________ cuts introns from the primary transcript and the final "processed" mRNA is produced.

Select one:

a. RNA cleaving

b. RNA translocation

c. RNA elongation

d. RNA splicing

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Transcription is initiated when RNA polymerase binds to

Select one:

a. a promoter

b. an initiator

c. a transciptor

d. a codon

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Complete the following sentences: "__________ connect the extracellular matrix with microfilaments. __________ connect intermediate filaments from adjacent cells."

Select one:

a. Cadherins, Integrins

b. Connexins, Cadherins

c. Integrins, Cadherins

d. Integrins, Connexins

e. Connexins, Integrins

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Which of the following regions of RNAs are translated?

Select one:

a. 5' UTR

b. exons

c. introns

d. 3' UTR

e. poly-A

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Control of gene expression in eukaryotic cells occurs at which level(s)?

Select one:

a. only the transcriptional level

b. epigenetic and transcriptional levels

c. epigenetic, transcriptional, and translational levels

d. epigenetic, transcriptional, posttranscriptional, translational, and posttranslational levels

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Cellular organelles containing hydrolytic enzymes are called:

Select one:

a. peroxisomes

b. lysosomes

c. ribosomes

d. mesosomes

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______ are chemicals or combinations of chemicals that take up excess hydrogen ions or hydroxide ions in order to keep the pH constant.

Select one:

a. acids

b. bases

c. salts

d. buffers

e. carbohydrates

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Which of the following proteins appear in some stages of the cell cycle and are degraded at other stages?

Select one:

a. kinases

b. cyclins

c. nucleotides

d. phosphatases

e. none of the above

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Which of the following correctly matches an organelle with its function?

Select one:

a. mitochondrion photosynthesis

b. nucleus cellular respiration

c. ribosome manufacture of lipids

d. lysosome movement

e. central vacuole storage

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What is the sequence corresponding to the following electropherogram obtained by Sanger sequencing (green: A; red:T; black: G; blue: C)?

Select one:

a. CCGTTATGAAC

b. GGCTTATGAAG

c. CAACTATTGCC

d. GGCAATAGTTG

e. CCGTTATCAAC

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Which of the following statement is true

Select one:

a. the two DNA strands are parallel and complementary

b. the two DNA strands are anti parallel and non-complementary

c. the two DNA strands are anti-parallel and complementary

d. none of these

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The energy-requiring process by which small molecules are joined to form larger molecules is specifically called

Select one:

a. metabolism

b. anabolism

c. catabolism

d. enzymatic reactions

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When DNA replication starts

Select one:

a. the phosphodiester bonds between the adjacent nucleotides break

b. the bonds between the nitrogen base and deoxyribose sugar break

c. the leading strand produces Okazaki fragments

d. the hydrogen bonds between the nucleotides of two strand break

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A(n)_______ is the movement of a segment of a chromosome from one chromosome to another nonhomologous chromosome

Select one:

a. inversion

b. translocation

c. deletion

d. duplication

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Complete the following sentences: "Replication forks from the same origin of replication extend __________. __________ DNA strand is used as template for the leading strand at one fork and for the lagging strand at the second fork. New DNA is synthesized from 5' to 3' on the __________."

Select one:

a. unidirectionally, A different, both the leading and lagging strands

b. bidirectionally, The same, leading strand

c. bidirectionally, The same, lagging strand

d. unidirectionally, A different, leading strand

e. bidirectionally, The same, both the leading and lagging strands

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Manufacturing recombinant DNA molecules involves cutting a gene from its normal location, inserting it into a circular piece of DNA from a bacterial cell, and then transferring the circle of DNA to cells of another species. Which of the below describe the circular piece of DNA?

Select one:

a. restriction enzyme

b. plasmid

c. bacteriophage

d. transposon

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Complete the following chemical equation to make it balanced: glycerol + ___ ? triacylglycerol + ___

Select one:

a. 3 fatty acid, 3 H2O

b. fatty acid, H2O

c. 3 OH-, 3 H+

d. 3 H2O, 3 fatty acid

e. fatty acid, 3 H2O

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Which structure is found in plant cells but not animal cells? Check all that apply.

Select one or more:

a. Cell wall

b. Chloroplast

c. Plastid

d. Central vacuole

e. Lysosomes

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BIOL308 Study Guide - Final Guide: 23S Ribosomal Rna, Transferase, Ribonuclease

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