BIOL 205 Lecture Notes - Lecture 12: Histone H2A, Atp Hydrolysis, Histone H2B

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graymole505

1 Jun 2016

School

University of Calgary

Department

Biology

Course

BIOL 205

Professor

Nelly Pant￩

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Document Summary

Bead on string (11nm) - nucleosomes (histone and looped dna) and spacer dna. Euchromatin - chromatin that is transcriptionally active, and thus "loosened" to allow access to the dna. Heterochromatin - transcriptionally inactive dna that has been tightly condensed to prohibit access. This happens in structural areas, such as around the centromers and telomeres. There are no genes to be found in consitutive heterochromatin areas. Genes in in facultative heterochromatin have been shut down temporarily, by restricting acces to the dna. This is a very important way that the cell controls gene transcription. Mutations in the genes that help regions of the chromosome transition between euchromatin and heterochromatin can be quite serious, and often result in cancer. While consitutive heterochromatin will never decondense, areas of euchromatin are quite active, and are often transitioned into areas of heterochromatin to restrict access and inhibit gene expression. Chromatin remodelling complexes, which can bind to the nucleosome complex and.

Related Questions

__________ are fairly small organelles that provide a safe place within the cell to carry out certain biochemical reactions that generate harmful, highly reactive oxygen species. These chemicals are both generated and broken down in the same location.

Lysosomes

Endosomes

Peroxisomes

Nucleosomes

Biologists cannot possibly study all living species. Instead, they try to understand cell behavior by studying a select subset of them. Which of the following characteristics are useful in an organism chosen for use as a model in laboratory studies?

rapid rate of reproduction

all of the above

ability to grow under controlled conditions

amenability to genetic manipulation

By definition, prokaryotic cells do not possess __________.

ribosomes.

a nucleus.

membrane bilayers.

replication machinery.

Cell biologists employ targeted fluorescent dyes or modified fluorescent proteins in both standard fluorescence microscopy and confocal microscopy to observe specific details in the cell. Even though fluorescence permits better visualization, the resolving power is essentially the same as that of a standard light microscope because the resolving power of a microscope is limited by the __________ of light.

intensity

absorption

wavelength

filtering

Choose the phrase that best completes this sentence: Microtubules ____________ and are required to pull duplicated chromosomes to opposite poles of dividing cells.

generate contractile forces

can rapidly reorganize

are found in especially large numbers in muscle cells

are intermediate in thickness

Despite the differences between eukaryotic and prokaryotic cells, prokaryotes have proteins that are distantly related to eukaryotic actin filaments and microtubules. What is likely to be the most ancient function of the cytoskeleton?

cell division

cell motility

vesicle transport

membrane support

DNA and RNA are different types of nucleic acid polymer. Which of the following is true of DNA but not true of RNA?

It contains thymine.

It has 5'-to-3' directionality.

It is single-stranded.

It contains uracil.

Double covalent bonds are both shorter and stronger than single covalent bonds, but they also limit the geometry of the molecule because they ____________________.

prevent additional bonds from being formed with the bonded atoms.

limit the rotation of the bonded atoms.

create a new arrangement of electron shells.

change the reactivity of the bonded atoms.

Drosophila melanogaster is a/an __________. This type of animal is the most abundant of all animal species, making it an appropriate choice as an experimental model.

mammal

amphibian

bird

insect

10.

If the isotope 32S has 16 protons and 16 neutrons, how many protons, neutrons, and electrons will the isotope 35S have, respectively?

16, 19, 17

16, 19, 15

16, 19, 16

16, 20, 15

11.

Living systems are incredibly diverse in size, shape, environment, and behavior. It is estimated that there are between 10 million and 100 million different species. Despite this wide variety of organisms, it remains difficult to define what it means to say something is alive. Which of the following can be described as the smallest living unit?

cell

organelle

protein

DNA

12.

Macromolecules in the cell can often interact transiently as a result of noncovalent interactions. These weak interactions also produce stable, highly specific interactions between molecules. Which of the factors below is the most significant in determining whether the interaction will be transient or stable?

the concentration of each molecule

the size of each molecule

surface complementarity between molecules

the rate of synthesis

13.

Many of the mechanisms that cells use for maintenance and reproduction were first studied at the molecular level in bacteria. Which bacterial species had a central role in advancing the field of molecular biology?

E. coli

S. pombe

C. elegans

D. melanogaster

14.

Many types of cells have stores of lipids in their cytoplasm, usually seen as fat droplets. What is the lipid most commonly found in these droplets?

cholesterol

isoprene

triacylglycerol

palmitic acid

15.

Mitochondria contain their own genome, are able to duplicate, and actually divide on a different time line from the rest of the cell. Nevertheless, mitochondria cannot function for long when isolated from the cell because they are __________________.

anaerobes.

viruses.

parasites.

endosymbionts.

16.

Mitochondria perform cellular respiration, a process that uses oxygen, generates carbon dioxide, and produces chemical energy for the cell. Which answer below indicates a correct pairing of material âburnedâ and the form of energy produced during cellular respiration?

17.

Polar covalent bonds are formed when the electrons in the bond are not shared equally between the two nuclei. Which one of these molecules contains polar bonds?

Lab Topic 1: The Process of Science

Introduction

1. Which of the following questions would you consider appropriate scientific questions that can be tested using the scientific method? For the statements that can be tested using the scientific method, explain how your experiment would be set up. Explain the different steps in the scientific method as they relate to this statement.

a. Does the pH of the soil affect the color of hydrangea flowers?

b. What properties of the soil influence the color of hydrangea flowers?

c. Do hydrangeas look more beautiful when grown in the right soil?

d. Was The Day After Tomorrow a better movie than Terminator?

e. Does grass require fertilizer in order to grow?

2. Read this hypothesis and answer the questions below:

Plants kept closer to windows grow larger than plants kept several feet away from windows.

a. Indicate the dependent variable:

b. Indicate the independent variable:

c. List 3 other variables that must be kept constant in this experiment (the control variables).

d. Write a prediction based on the above hypothesis.

Exercise 1.1

Take a Deep Breath

Students will need to take a picture of themselves or their group walking up and down on the step or doing other exercise. Include a note with your name and date on an index card in the picture. Insert picture here:

1. Identify the following in the experimental design. You will need to refer to the protocol to answer this question.

a. Independent variable:

b. Dependent variable:

c. Experimental dataset:

d. Control dataset:

e. Hypothesis:

2. Fill in the data for each individual in your group for the Breath experiment.

	Length of time breath can be held (seconds)
Individual Tested	Resting	After 1 minutes of exercise	After 5 minutes of exercise




Average (take the average for each column)

3. Look at the averages for all individuals in your group. Was the hypothesis you stated in the previous question supported by the âaverage dataâ? Explain your answer!!!

4. Now look at the data for each individual separately. Was there data for anyone in your group that did not support the hypothesis? If yes, explain whythis could be.

5. How many replicates did your group have?________________ Why is it good to have more than one replicate?

Exercise 1.2

Letâs Graph

In this exercise, you will be graphing the data that you collected in exercise 1.1.

1. In exercise 1.1, you identified the independent and dependent variables. Which one goes on the X axis of the graph and which goes on the Y axis?

2. Will you make a line or a bar graph of your data? Explain why you chose this type of graph.

3. You will need to use excel to generate a graph of your data. On this graph, you will need to label the title, independent variable, dependent variable and possibly the legend. You will need to select an appropriate scale so the data is spread out on the graph.

*Consult with your instructor to see how he/she would like for you to submit your graph. You might work on it in class and submit it through D2L or you might submit it at a different time. If you are taking the online version of the class, you will need to use Excel or word to make the graph.

Exercise 1.3

You will need to get the data under exercise 1.3 in the protocol sheet to complete these sections.

1. What is the dependent variable?

2. What is the independent variable?

3. Which, if any, of these individuals has diabetes? ___A or B ___?

4. What data do you have to support your hypothesis?

5. Construct a graph showing the time after eating each group had the greatest blood glucose levels.

BIOL 205 Lecture Notes - Lecture 12: Histone H2A, Atp Hydrolysis, Histone H2B

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