BIOL 112 Lecture 10: BIOL 112- Nucleic Acids- DNA structure, assembly and organization
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Describe and recognize the structural components of nucleic acids, including the monomers, the directionality, and the reason for the directionality. Identify key structural differences between dna and rna. Label a schematic diagram of double stranded dna to show the 3" and 5" ends, including the functional group found at each 3" and 5" position. Know and apply the chargaff"s (watson & crick) base pair rules. Major groove, minor groove - due to the geometry of how the bases pair. Angle of base interaction is tilted, distorts structure. 2 purines: no room for bases0 there can be h-bonds but shape will bulge out. 2 pyrimidines: in order to h bond the molecules will tilt inwards to get close enough stacking interactions interrupted b/c structure is not flat = too much. Watson-crick base pairs all have the same general geometry: Regular flat stacking interactions between bases above and below. Most important factor: only certain purine-pyrimidine base pairs have the same geometries.