BIOL 0280 Lecture Notes - Lecture 21: Consensus Sequence, Repressor, Dna-Binding Domain

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Rna polymerase binds to dna at promoter sequences. Sigma subunit mediates promoter recognition: coli has 7 sigma factors. Sigma 70 recognizes most e. coli promoters (housekeeping) Sigma 32 recognizes heat shock promoters (different consensus sequence) *ability to distinguish genes into housekeeping vs. heat shock. Others: modulation of cellular n levels, stationary phase genes, chemotaxis genes, ec functions. Affinity of rna polymerase is also regulated by binding proteins to/near promoters. Repressors: impede access of rna polymerase to dna. In negative regulation, can either be on promoter in absence of ligand or off promoter in absence. Repressor binding site is operator because it interferes. Encodes genes required for use of lactose as a c source. Tetramerizes and binds o3 and o1 together or o1 and o2 --> looping of either p or lacz. Binds to the operator (repressor binding site) in the absence of allolactose (inducer) --> transcription is repressed.

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