BIO 209 Lecture Notes - Lecture 12: Five-Prime Cap, Start Codon, World Federation Of Trade Unions

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Initiator amino acid is methionine: not formylated. Initiator complex forms at the 5" end of mrna: not a specific sequence like in prokaryotes. Prokaryotes have shine- dalgarno sequence that positions the small ribosomal subunit to allow alignment with the start codon: details: 7-mg cap on 5" end of mrna is bound by cap-binding proteins (cbp) Cbp helps with recognition and binding of the small ribosomal unit. Complex moves 5" to 3" on mrna until it finds the start codon: once found, initiation factors fall off. Chain elongation: aminoacyl-trna binds to a site. Binds to factor-binding center when the correct codon-anticodon interaction occurs: hydrolyses bound energy is released. P-site trna moves to e-site: a-site trna moves to p-site, mrna moves by three nucleotides. This allows the next codon to be exposed: hydrolyzes gtp to facilitate translocation. Peptide bond forms: peptidyl transferase- cataltic activity that is specific to rna, utalyzes activity of gtp hydrolysis.

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