BIOL 142 Lecture Notes - Lecture 23: Replica Plating, Microrna, Gene Expression

65 views9 pages
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Explain(the(general(mechanisms(of(gene(regulation.(
1.
Describe(the(role(of(lactose(in(the(induction(of(β-Galactosidase(in(E.(coli.(
2.
Design(an(experiment(using(indicator(plates(coated(with(X-Gal(to(assay(β-
Galactosidase(activity.(
3.
Explain(how(replica(plating(was(used(in(a(genetic(screen(to(identify(the(lacZ,(
lacY,(and(lacI(genes.
4.
1.(A(cell(does(not(express(all(of(its(genes(all(of(the(time.(
0"%"("12$"//&3%(3,,4$/(56"%(#('"%"(2$374,-(&/(#,-&."89(*"&%'(/9%-6"/&:"7(#%7(
4/"7(&%(#(,"88;(<"'48#-&3%(3=('"%"("12$"//&3%(&/(,$&-&,#8(-3(-6"("==&,&"%-(4/"(3=(
$"/34$,"/(#%7(-64/(/4$.&.#8;(
>
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"12$"//"7@(#%7(56"%(-6"9(#$"("12$"//"7;(
>
0"%"/(,#%(*"(4%7"$(-$#%/,$&2-&3%#8@(-$#%/8#-&3%#8@(3$(23/-A-$#%/8#-&3%#8(,3%-$38
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B12$"//&%'(-6"C(#88(-6"(-&C"(
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Transcriptional,control 3,,4$/(56"%(-6"(,"88(73"/(%3-(2$374,"(C<FH;(
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Translational,control #8835/(-6"(,"88( -3(2$"."%-(-6"(-$#%/8#-&3%(3=(#%(C<FH(C38",48"(
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Phosphorylate 2$3-"&%(-3J
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§
Inhibit 2$3-"&%(*9(6&7&%'(#,-&."(/&-"
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1. D6&,6(3=(-6"(=38835&%'(8"."8/(3=('"%"("12$"//&3%($"'48#-&3%(#8835/(-6"(C3/-(
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transcriptional,control,A.
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2. D6&,6(3=(-6"(=38835&%'(8"."8/(3=('"%"("12$"//&3%($"'48#-&3%(#8835/(-6"(C3/-($#2&7(
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post-translational,controlC.
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2.(Lactose(induces(β-Galactosidase(expression(in(E.(coli.
!#,-3/"(U(V('84,3/"(W(V('#8#,-3/">
B;(,38&(%""7/(#%("%:9C"(-3(*$"#G(42(-6"(*3%7(3=('84,3/"(#%7('#8#,-3/">
B;(,38&(2$374,"/(6&'6(8"."8/(3= β-galactosidase MXA'#8N(3%89(56"%(8#,-3/"(&/(
2$"/"%-(&%(-6"("%.&$3%C"%-
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P"=3$"(&-(,#%(4-&8&:"(8#,-3/"@(B;(,38&(C4/-(-$#%/23$-(&-(&%-3(-6"(,"88@(56"$"(-6"(
"%:9C"(XA'#8#,-3/&7#/"(,#%(,8"#."(&-(-3(2$374,"('84,3/"(#%7('#8#,-3/"
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3.(X-Gal(is(a(dye(used(to(detect-Galactosidase(activity
I3(G%35(56&,6(,"88/(#$"(,$"#-&%'(-6"("%:9C"
H//"//(56"-6"$(-6"(/2",&=&,("%:9C"(&/(3$(&/%E-("12$"//"7(*([A0#8(-338
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[A'#8(833G/(G&%7(3=(8&G"(8#,-3/"
D6"%(934(,4-(-6"('89,3/&7&,(8&%G#'"@(934(=$""(42(-6"([(C38",48"/(-6#-(#$"(
,383$8"//
T%(-6"(,4-(=3$C@(-6"9(2$",&2&-#-"(#%7(*",3C"(*84"
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3. T%(!"#$%&%'?#-#89-&,/@(7"/&'%(#%("12"$&C"%-(4/&%'(&%7&,#-3$(28#-"/(-3(-"/-(&=(B;(,38&(
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In(the(presence(of(glucose,(these(cells(do(not(produce(B-Gal(because(
they(have(glucose
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B-Gal(gene(stays(silent
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Shows,the,effect,of,environmental,conditions,on,a,specific,gene>
4.(To(identify(the(required(genes(for(lactose(metabolism,(Monod(and(François(Jacob(
isolated(E.(coli(mutants(that(could(not(metabolize(lactose.
Genetic,screeningJ(#22$3#,6(-3('"%3C"(/-479(56"$"(934($#%73C89(*$"#G('"%"/(
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Prokaryotic*Gene*Regulation*I
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!"#$%&%'()*+",-&."/
Explain(the(general(mechanisms(of(gene(regulation.(1.
Describe(the(role(of(lactose(in(the(induction(of(β-Galactosidase(in(E.(coli.(2.
Design(an(experiment(using(indicator(plates(coated(with(X-Gal(to(assay(β-
Galactosidase(activity.(
3.
Explain(how(replica(plating(was(used(in(a(genetic(screen(to(identify(the(lacZ,(
lacY,(and(lacI(genes.
4.
1.(A(cell(does(not(express(all(of(its(genes(all(of(the(time.(
0"%"("12$"//&3%(3,,4$/(56"%(#('"%"(2$374,-(&/(#,-&."89(*"&%'(/9%-6"/&:"7(#%7(
4/"7(&%(#(,"88;(<"'48#-&3%(3=('"%"("12$"//&3%(&/(,$&-&,#8(-3(-6"("==&,&"%-(4/"(3=(
$"/34$,"/(#%7(-64/(/4$.&.#8;(
>
?"88/(#$"(."$9(/"8",-&."(#*34-(-6"('"%"/(-6"9("12$"//@(635(/-$3%'89(-6"9(#$"(
"12$"//"7@(#%7(56"%(-6"9(#$"("12$"//"7;(
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0"%"/(,#%(*"(4%7"$(-$#%/,$&2-&3%#8@(-$#%/8#-&3%#8@(3$(23/-A-$#%/8#-&3%#8(,3%-$38>
B12$"//&%'(-6"C(#88(-6"(-&C"(
D3487(*"("%"$'"-&,#889( 4%=#.3$#*8"
D3487%E-(6#."(/2",&=&,(,"88( -92"/
F""7(-3(C#G"(7&/-&%,-(-&//4"/(#%7(3$'#%/
§
>
Transcriptional,control 3,,4$/(56"%(-6"(,"88(73"/(%3-(2$374,"(C<FH;(
I6"(,"88( #.3&7/(-6"(2$374,-&3%(3=(-6"/"('"%"/(*9(4-&8&:&%'($"'48#-3$9(2$3-"&%/(
-6#-(2$"."%-(<FH(2389C"$#/"(=$3C(*&%7&%'(-3(#(2$3C3-"$
>
D6#-(934(%""7(-3(C#G"(#%(C<FH>
<"'48#-"(&=($"'48#-3$9(2$3-"&%/(#$"(#,-&."(3$("."%(C#7">
Translational,control #8835/(-6"(,"88( -3(2$"."%-(-6"(-$#%/8#-&3%(3=(#%(C<FH(C38",48"(
-6#-(6#/(#8$"#79(*""%(-$#%/,$&*"7;(
I6&/(,#%(3,,4$(-6$34'6(C#%9(C",6#%&/C/
>
<"'48#-3$9(C38",48"/(,#%(/2""7(42(C<FH(7"'$#7#-&3%;
>
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miRNAJ(/63$-(%4,8"&,(#,&7(/-$"-,6"/(-6#-(#$"(,3C28"C"%-#$9(-3(-#$'"-(<FH/K(#,-(
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-6"(2$3-"&%/
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2.(Lactose(induces(β-Galactosidase(expression(in(E.(coli.
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Prokaryotic*Gene*Regulation*I
D"7%"/7#9@( H2$&8(VV@(_fVk VVJ\k(HQ
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!"#$%&%'()*+",-&."/
Explain(the(general(mechanisms(of(gene(regulation.(1.
Describe(the(role(of(lactose(in(the(induction(of(β-Galactosidase(in(E.(coli.(2.
Design(an(experiment(using(indicator(plates(coated(with(X-Gal(to(assay(β-
Galactosidase(activity.(
3.
Explain(how(replica(plating(was(used(in(a(genetic(screen(to(identify(the(lacZ,(
lacY,(and(lacI(genes.
4.
1.(A(cell(does(not(express(all(of(its(genes(all(of(the(time.(
0"%"("12$"//&3%(3,,4$/(56"%(#('"%"(2$374,-(&/(#,-&."89(*"&%'(/9%-6"/&:"7(#%7(
4/"7(&%(#(,"88;(<"'48#-&3%(3=('"%"("12$"//&3%(&/(,$&-&,#8(-3(-6"("==&,&"%-(4/"(3=(
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>
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"12$"//"7@(#%7(56"%(-6"9(#$"("12$"//"7;(
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0"%"/(,#%(*"(4%7"$(-$#%/,$&2-&3%#8@(-$#%/8#-&3%#8@(3$(23/-A-$#%/8#-&3%#8(,3%-$38>
B12$"//&%'(-6"C(#88(-6"(-&C"(
D3487(*"("%"$'"-&,#889( 4%=#.3$#*8"
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I6"(,"88( #.3&7/(-6"(2$374,-&3%(3=(-6"/"('"%"/(*9(4-&8&:&%'($"'48#-3$9(2$3-"&%/(
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Translational,control #8835/(-6"(,"88( -3(2$"."%-(-6"(-$#%/8#-&3%(3=(#%(C<FH(C38",48"(
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1. D6&,6(3=(-6"(=38835&%'(8"."8/(3=('"%"("12$"//&3%($"'48#-&3%(#8835/(-6"(C3/-(
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Document Summary

Describe the role of lactose in the induction of - galactosidase in e. coli. Design an experiment using indicator plates coated with x-gal to assay - Explain how replica plating was used in a genetic screen to identify the lacz, lacy, and laci genes: a cell does not express all of its genes all of the time. Gene expression occurs when a gene product is actively being synthesized and used in a cell. Regulation of gene expression is critical to the efficient use of resources and thus survival. Cells are very selective about the genes they express, how strongly they are expressed, and when they are expressed. Genes can be under transcriptional, translational, or post-translational control. Transcriptional control occurs when the cell does not produce mrna. The cell avoids the production of these genes by utilizing regulatory proteins that prevent rna polymerase from binding to a promoter. Regulate if regulatory proteins are active or even made.

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