BMB 401 Lecture Notes - Lecture 4: Ketone Bodies, Electrochemical Gradient, Thiolase

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Fatty acids are activated by attaching a coa using acyl-coa synthetase. Acyl groups must be converted to carnitine so that the carnitine shuttle can then shuttle the molecule from the cytosol through the imm where carnitine is then transferred back to an acyl group. The right picture shows the b oxidation step once inside the imm to get from acyl-coa to acetyl coa. It is called b oxidation because the acyl group of acyl-coa is oxidized at the. B carbon atom in a repetitive fashion each time with nucleophilic substitution and in doing so the leaving group each time is an acetyl coa so this process cycles until it has been broken down into n acetyl-coa groups. Fadh2 and nadh go into the etc and are then the energy they have drives the proton gradient so the protons can flow through.

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