BIOE 20C Lecture Notes - Lecture 10: Ribosomal Dna, Stopwatch, Cladistics

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Fossils sediment plays a key role in fossil formation. Most mutations are neutral can use neutral mutations to estimate time of divergence for lineages relationship should be linear. Mutations can be affected by selection differences in mutation rates between species solution: independently calibrate fossils. More on cladistics considers shared vs non-shared traits symplesiomorphy trait shared with ancestor, ancestral trait synapomorphy: shared derived trait, not present in ancestor ingroup, clade that shares synapomorphy outgroup, closest ancestor of the ingroup lacks synapomorphy. Phylogenetic inferences uses phylogenies to understand evolutionary history and processes examples using molecular and morphological data to estimate phylogenies. Most species incapable of self fertilization different flower morphology in selfing vs. non-selfing plants. Maximum parsimony using only flower anatomy says yes. Molecular analysis says no incorporating both suggest they are polyphyletic. Ratite evolution phylogenetic analysis reveals expected and unexpected pattern biogeographical and molecular data both agree and disagree.

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