BIOL1003 Study Guide - Quiz Guide: Dna Ligase, Belgian Blue, Noncoding Dna

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School
Department
Course
Professor
DNA
Proteins and nucleic acids in cells
Viruses (bacteriophage)
oNo nucleus
oNo membrane
oNo “cell”
oProtein capsule
oNucleic acid inside
oMost simple form that contains genetic information
oGreatest variability in the types and ways genetic information is used
Bacteria
oCell surroudned by membrane and capsule
oNo nucleus- nucleic acids freely in cell
oProteins in membranes and capsule
Eukaryotes
oCell surrounded by membrane
oNucleus surrounded by membrane
oNucleic acid and protein in nucleus
oProteins in membrane
oProteins in organelles
oHas internal environments
oDNA is confined to the nucleus and is surrounded by three membranes
Griffith’s experiment
Griffith was looking for a vaccine for pneumonia by studying mice infected with two
strains of the causative bacterium:
oS strain- virulent (lethal)
oR strain- non-virulent (not lethal)
Griffith proposed that cells contained a non-living ‘transforming principle’ that could
transform one cell into another
Dead matter without a
living spirit can change the
heritable nature of a living
organism (don’t need life
to maintain genetic information)
Genetic traits are encoded
in molecules- questioned
whether it was proteins or
nucleic acids
Tried to link heritability to a
molecule from a chemical
perspective
Avery, MacLeod and McCarty’s experiment
Aimed to identify transforming principle
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Grew large batches of S-strain bacteria and tested which of different cellular
components was the transforming principle
Treated cell extracts with:
oProteinase- transformation still occurs (breaks down proteins)
oNuclease- no transformation (breaks down nucleus)
Implies that DNA is the transforming principle
No-one believed them
Hershey-Chase experiment
Add 35S: radioactive proteins
oRadioactive phage heads
oNo radioactivity in phage progeny
Add 32P: radioactive DNA
oNo radioactivity in phage heads
oRadioactive phage progeny
Summary
Griffith 1928: genetic traits are molecules
oPneumococcus and mouse system
Avery, MacLeod and McCarty 1944: the molecule is DNA
oPneumococcus and mouse system
Hershey and Chase 1952: the molecule is DNA
oBacteriophage and Escherichia coli system
Linking DNA to proteins
1950: Chargaff’s rules:
oComposition of DNA varies from one species to another
oBut in every species A matches with T and G matches with C
Early 1950s: Franklin and Wilkins:
oX-ray crystallogram of DNA suggests a helical structure (they didn’t actually
think so)
oOnly believed the molecule was DNA in 1952
1953: Watson and Crick:
oStructure of DNA
Watson and Crick
Used X-ray images from Rosalind Franklin (Maurice Wilkins and
Raymond Gosling)
Knowledge of chemical composition of DNA
Built models
Had no real evidence for their structure
Nucleoside monophosphate building blocks
Schematic outline of the molecular structure of DNA
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The sugar phosphate backbone is the same along the
length of the molecule
Nucleotide monophosphates are joined by
phosphodiester bonds
DNA is a double stranded helix
DNA becomes more stable by making the two strands
anti-parallel
One has the phosphate facing up and sugar facing
down, and the next has it the other way round
Each has a base and a sugar-phosphate backbone
(sugar attached to base then phosphate on end)
Number of carbons of the sugar represents open ends
where further joining and polymerisation is possible
Strong covalent bonds between phosphates
Weak secondary bonds between bases
The two DNA strands are antiparallel
One end of each strand has a free 5’ phosphate group
The other end has a free 3’ hydroxyl group
The two strands are linked by hydrogen bonds between bases
Base pairs are linked by hydrogen bonds
Hydrogen bonds:
oAre weak bonds
oAre important in structures of biological molecules
oOccur between an electronegative atom (often oxygen or
nitrogen) and a hydrogen atom
G and C can form 3 bonds
A and T can form 2 bonds
Complementary base pairing
Too wide and close- not enough room for hydrogen bond
Too narrow- too far away for a bond to form
Can only form a bond with a long structure (purine) and a small structure
(pyrimidine)
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Document Summary

Viruses (bacteriophage: no nucleus, no membrane, no cell , protein capsule, nucleic acid inside, most simple form that contains genetic information, greatest variability in the types and ways genetic information is used. Bacteria: cell surroudned by membrane and capsule, no nucleus- nucleic acids freely in cell, proteins in membranes and capsule. Eukaryotes: cell surrounded by membrane, nucleus surrounded by membrane, nucleic acid and protein in nucleus, proteins in membrane, proteins in organelles, has internal environments, dna is confined to the nucleus and is surrounded by three membranes. Griffith was looking for a vaccine for pneumonia by studying mice infected with two strains of the causative bacterium: s strain- virulent (lethal, r strain- non-virulent (not lethal) Griffith proposed that cells contained a non-living transforming principle" that could transform one cell into another. Dead matter without a living spirit can change the heritable nature of a living organism (don"t need life to maintain genetic information)

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