PCB 4674 Chapter Notes - Chapter 8: Linkage Disequilibrium, Genetic Recombination, Outcrossing

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What eliminates linkage equilibrium from a population: sexual reproduction (meiosis with crossing over and outbreeding) Brings together chromosomes with different haplotypes: genetic recombination: creation of new combinations of alleles during sexual reproduction. Tends to randomize genotypes at one locus with respect to genotypes at another. P and q- frequencies of a and a. S and t- frequencies of b and b. Why does linkage disequilibrium matter: we have identified that multilocus selection, genetic drift, and population admixture as evolutionary mechanisms that can create it. If locus a and locus b are in linkage disequilibrium, selection at locus a changes the frequencies of the alleles at locus b. So a single-locus population genetics model that looks only at locus b would make inaccurate predictions about its evolution. Genetic hitchhiking: because of linkage disequilibrium, single-locus studies can yield misleading conclusions. Human locus for ergothioneine transporter: the good news about linkage disequilibrium.

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