Microbiology and Immunology 2500A/B Lecture Notes - Human Microbiome Project, Gut Flora, Intracellular Parasite

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Microorganisms can provide us with immune protection from infectious diseases. Gut microbiota is associated with health and disease. The human body has more microorganisms than human cells. The aims of the human microbiome project are to map every bacterium in the body and to associate changes in the microbiome with human health/diseases. Microorganisms with the potential to cause infectious disease are called pathogenic microorganisms or pathogens. Pathogens can include bacteria, viruses, parasites, and fungi. Many normal flora are opportunistic pathogens, which means they can become pathogenic when opportunity arises. Extracellular pathogens reside outside host cells, in the interstitial spaces, blood, lymph, and epithelial surfaces. Intracellular pathogens (most commonly viruses) reside inside host cells, in the cytoplasm or in vacuoles. Immune responses are different to extracellular and intracellular pathogens. Classifying microorganisms as either an intracellular pathogen or an extracellular pathogen is sometimes incorrect because many pathogens have both an extracellular and intracellular phase.

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