BI226 Lecture Notes - Lecture 2: Genetic Linkage, Chi-Squared Distribution, Synteny

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7 Jul 2015
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Genetic linkage and mapping: morgan established chromosome theory of inheritance, applied linkage and recombination to genetic mapping. Linked genes are always syntenic and close to eachother: genetic linkage leads to production of significantly more gametes with parental allele combinations. Indications of gene linkage: genetic linkage can be observed by looking at expected versus outcome phenotypic or genotypic ratios. Linked genes will show higher ratio of parental gametes than predicted. Calculating recombination frequency: r= number of recombinants/total amount of progeny, reflection of the distance between two genes. Note: in this course, we will only ever use test crosses when looking at linked genes. Practice question: the a and b loci are 20 map units apart. Ab/ab will be ab: always test cross. 20 map units apart means 20% recombinants, so then 80% parental: ab/ab x ab/ab, classify as parental or recombinant (parental will be the most common) If no crossing over occurs we will get aabb and abab (80% of progeny)

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