BIO 330 Lecture Notes - Lecture 13: Differential Interference Contrast Microscopy, Scanning Electron Microscope, Transmission Electron Microscopy

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24 May 2018
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BIO 330 Lecture notes 13:
Robert Hooke
-first scientist to observe cork cells (NOT alive)
-called them cells because they reminded him of monk's rooms in a monastery
Antonie van Leeuwenhoek
-observed LIVING organisms from pond water (algaea and protozoa); called them
animacules
-discovered bacteria on his teeth and squamous cells in the mouth (first representations of
human cells)
Shielden and Shwaan
1838- all plants are made up of cells
1839- all animals are made up of cells
Rudolf Virchow
1855- concluded that cells come from preexisting cells
Cell Theory
All organisms consist of one or more cells
Cells arise from other cells
Cells are the basic units of structure and reproduction
Cytology
study of cell structure using optical techniques (microscopes)
Light Microscopy
uses sunlight or artificial light (0.2micron-2mm)
bright field microscopy
phase-contrast microscopy
Differential interference contrast microscopy
fluorescence microscopy
confocal microscopy
electron microscopy
uses electrons (0.2 nanometer- 100micron)
-scanning EM
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-transmission EM
Scanning Electron Microscopy (SEM)
scans the surface by deflecting electrons
Transmission Electron Microscopy (TEM)
transmits electrons through a specimen to form an image
Immunocytochemistry
when a fluorescent tagged antigen binds to a specific molecule, making a protein visible
A model organism is a species that
has been widely sudied
well characterized
easy to manipulate
has particular advantages
Are covalent or noncovalent bonds easier to break?
noncovalent are easier to break
Ultraviolet light
can break carbon bonds (unlike visible light and infrared light)
Hydrocarbons
-not soluble in carbon
-important in the biological membrane (tails of phospholipids)
Stereoisomers
mirror images that are not superimposable
A compound with n asymmetric carbons will have how many stereoisomers?
2^n
What causes the dipole in H2O?
electronegative oxygen pulling the electrons towards it
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Hydrogen bonds vs covalent bonds
h bonds are 1/10 as strong
vast number of hydrogen bonds in water leads to
high heat of evaporation
high specific heat
high boiling point
high surface tension
Why is water an excellent solvent?
polarity and it can form ionic and hydrogen bonds with solutes
Cells contain 3 different kinds of macromolecules
proteins
nucleic acids
polysaccharides
Polymerization process
monomer gets activated by connecting to a carrier molecule (ATP driven reaction)
Addition of each monomer occurs via condensation reaction
polymerization has directionality
Molecular chaperones
assist the assembly process by inhibiting interactions that would cause incorrect folding
Nonpolar amino acids
Polar amino acids
Acidic amino acids
aspartate and glutamate
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Document Summary

Bio 330 lecture notes 13: robert hooke. First scientist to observe cork cells (not alive) Called them cells because they reminded him of monk"s rooms in a monastery: antonie van leeuwenhoek. Observed living organisms from pond water (algaea and protozoa); called them animacules. Transmission em: scanning electron microscopy (sem, scans the surface by deflecting electrons, transmission electron microscopy (tem) transmits electrons through a specimen to form an image. Alpha helix (h bonds between every fourth aa- bonds are parallel to the axis) Beta sheet (h bonds between two different regions of the polypeptide- bonds are perpendicular to the axis: tertiary structure. Fibrous and globular proteins: fibrous proteins, strong secondary structure that determines protein shape, globular proteins. Most cellular structure and function proteins are globular. Unique: a-t hydrogen bonds vs g-c hydrogen bonds, at = 2 h, gc = 3 h. Allows for high recognition: stable double helix must be, antiparallel and complimentary.