🏷️ LIMITED TIME OFFER: GET 20% OFF GRADE+ YEARLY SUBSCRIPTION →
Log in
HomeClass Notes1,200,000CA670,000

Biology 1001A Lecture Notes - Lecture 1: Genotype Frequency, Allele Frequency, Genetic Drift

49 views6 pages
School
Western University
Department
Biology
Course
Biology 1001A
Professor
Beth Mac Dougall Shackleton Tom Haffie

For unlimited access to Class Notes, a Class+ subscription is required.

Document Summary

To predict how certain factors may influence genetic variation, population geneticists first describe the genetic structure of a population. They then create hypotheses, formalized in mathematical models, to describe how evolutionary processes may change the genetic structure under specified conditions. Finally, researchers test the predictions of these models to evaluate the ideas about evolution that are embodied within them. Meanings of gene pool, genotype frequencies, allele frequencies, genetic equilibrium. The population"s gene pool is called the sum of all alleles at all gene loci in all individuals. To describe the structure of a gene pool, scientists: Identify the genotypes in a representative sample and calculate genotype frequencies (% individuals possessing each genotype): calculate allele frequencies, the relative abundances of the different alleles. The symbol p is used to identify the frequency of one allele, and q to identify the frequency of the other allele. (for locus with two alleles) How to calculate genotype frequencies expected under genetic equilibrium.

Get access

Grade+20% off
$8 USD/m$10 USD/m
Billed $96 USD annually
Grade+
Homework Help
Study Guides
Textbook Solutions
Class Notes
Textbook Notes
Booster Class
40 Verified Answers
Class+
$8 USD/m
Billed $96 USD annually
Class+
Homework Help
Study Guides
Textbook Solutions
Class Notes
Textbook Notes
Booster Class
30 Verified Answers

Related Documents

Biology 1001A Lecture Notes - Lecture 1: Symplesiomorphy, Fetus, Mutation
orangemacaw159
Biology 1001A Lecture Notes - Lecture 13: Genotype Frequency, Allele Frequency, Gene Pool
carminewalrus319
Biology 1001A
Final Exam
Study Guide
Biology 1001A Study Guide - Final Guide: Linnaean Taxonomy, Natural Reservoir, Monarch Butterfly
maroongoat576

Related Questions

Hemoglobin and Fitness Instructions Directions: Neutral Evolution

1. Obtain 20 beans of two different colors (e.g., white and red). Count out 16 white and 4 red beans. The white beans represent the Hn allele and the red beans represent the Hs allele. This is the genetic makeup of your starting population. (Note: You can use any objects that can readily be categorized into two groups, such as coins, colored rocks, or paper clips.)

2.Calculate the frequency of both alleles [f(Hn) and f(Hs)] and record them in Table 1. In our experiment frequency is a measure of how many copies of a given allele exist in the gene pool (i.e., a proportion). Use decimal values. 


3.Arrange the beans into pairs. These pairs represent the genotype of each of 10 individuals in the population. Record the number of individuals with each genotype [f(Hn Hn), f(Hn Hs), and f(HsHs)] in Table 1. 


4.Now imagine that the individuals are living and reproducing with each individual reproducing at the same rate (i.e., all individuals produce two copies of each of their alleles into the next generation). Obtain enough beans to represent the next generation— the offspring generation—and then let the parental generation “die”. 


5.Calculate the frequency of each allele in the offspring generation and record it in Table 1. 


Answer the questions that follow in Table 1. 


Table 1

f(HnHn) f(HnHs) f(HsHs) f(Hn) f(Hs)
oiginal generation
offspring generation

Answer the following questions to help you understand the exercise:

What happened to the frequency of the common allele? 


What happened to the frequency of the rare allele? 


What happened to the frequency of the common and rare alleles when the starting frequencies were different from yours

What happens to allele frequencies from one generation to the next if there are no evolutionary forces acting on the population? 


Messenger RNA (mRNA)...

a) Is a structural part of a ribosome

b) Brings amino acids to DNA

c) Carries genetic information from the nucleus to the cytoplasm

d) Is a structural part of a chromosome

e) Initiates and directs chemical reactions

Mr. Potato is homozygous dominant (KK), his son, Potato Jr. is heterozygous (Kk). Based on this information, what are the possible genotypes for Mrs. Potato? (Hint: use a Punnet Square).

a) Her genotype is definitely kk

b) Her genotype is either Kk or kk

c) Her genotype is either KK or Kk

d) Her genotype is either KK, or Kk, or kk

e) Mr. Potato cannot be Potato Jr’s biological father

12. Homologous chromosomes:

a) Are members of different chromosome pairs

b) Are genetically identical

c) Carry genetic information that influences the same traits (same genes but probably different alleles)

d) Are only inherited from the mother

e) Are only inherited from the father.

“Fitness” in an evolutionary sense, refers to an individual’s:

a) Strength

b) Reproductive success

c) Aggressiveness

d) Size

e) Age at death

The fact that individuals who possess favorable traits are more likely to survive and reproduce than those who possess less favorable traits is the basis for the theory of...

a) uniformitarianism.

b) natural selection.

c) the inheritance of acquired characteristics.

d) catastrophism.

e) the fixity of species.

Even with strong selection, genetic variation of a population can be maintained because:

a) Selection only affects one gene at a time.

b) The effects of many alleles are hidden from selection by the effects of other alleles

c) Mutation constantly adds new alleles at an extremely fast rate.

d) Populations always go extinct before their gene frequencies are dramatically altered.

e) Only a and c

Gene Flow is defined as the:
a) Production of new alleles
b) New musical group in which Adam Levine will be the leading vocalist
c) Exchange of genes between populations
d) differential reproductive success of individuals
e) Process by which a DNA base gets extracted out of the nucleus to initiate the process of protein synthesis.

The basic unit of DNA is a molecule called a: a) Nucleotide

b) Base
c) Thymine
d) Prokaryoticcell e) mRNA

How many bases code for one amino acid? a) one

b) two
c) it depends on what amino acid it is d) three
e) four

Hemophilia is a condition that affects: a) more females than males
b) more males than females
c) females and males equally

d) only children born prematurely
e) individuals with a missing portion of chromosome number 5

A clear example of directional selection is:
a) Darwin finches with deeper and thicker beaks associated to a severe drought b) Sickle cell anemia in regions in which Malaria is endemic
c) Achondroplasticdwarfism
d) Fly halteres becoming fully developed wings after modification of a hox gene e) all of the above

Meiosis is evolutionarily significant because:
a) New combination of alleles can arise through independent assortment and crossing over

22.

23.

24.

25.

26.

b) It is the mechanism by which body tissues are repaired
c) It creates somatic cells that are crucial for our body organs to maintain us alive d) It allows forensics to determine the cause of death of unidentified people
e) none of the above

Homologous chromosomes:

a) Are exact copies of each other and contain exactly the same genetic material
b) Are members of different chromosome pairs
c) Are only inherited from the father
d) carry genetic information that influences the same traits (the same genes), however, each of the homologous chromosomes can contain different versions of the same gene (different alleles).

e) carry genetic information that influences different traits because each of the homologous chromosomes contains completely different genes at very different loci

How many chromosome pairs occur in a normal human somatic cell?

a) 46 b) 23 c) 22 d) 24 e) 45

What is the scientific method? Use bullet points to describe the 4 major components.

How is a hypothesis different from a theory?

List the four major components (described during class) necessary for natural selection to occur [AKA Darwin’s Four Postulates] (PDF1-3).

27. Who was Thomas Malthus? In what way(s) Malthus was influential for Darwin’s Theory of Natural Selection? Hint: populations vs resources.

29. What amino acids are being coded for by the gene segment provided below? Nucleotide triplets and their corresponding amino acids are:
ACA= Cysteine; AAA=Phenylalanine; TGG=Threonine; CCT=Glycine; GAT=Leucine; ATA=Tyrosine; AGG=Serine; TCT=Arginine

a) Threonine, serine, glycine, tyrosine, leucine, phenylalanine, arginine, cysteine.

b) Tyrosine, leucine, glycine, threonine, arginine, threonine, serine, cysteine.

c) Arginine, cysteine, serine, glycine, threonine, leucine, phenylalanine, tyrosine.

d) Phenylalanine, leucine, tyrosine, glycine, serine, threonine, cysteine, arginine.

e) Phenylalanine, leucine, tyrosine, glycine, threonine, phenylalanine, arginine, serine.

PURPOSE: To examine the genetic, Biochemical, and Cell biological mechanisms of disease development.

In class we have focused on many of the fundamental principals and techniques of genetics and molecular biology. For this assignment I want you to see how these ideas are applied in studying genetic diseases. In addition, I want you to get insight into the experimental design and procedures that are used for expanding our understanding of genetics and how they are applied to studying and treating human genetic diseases.

The goal will be a final research paper that will be due by the last day of class (April 3, 2016). An outline of what is expected to be presented in the paper is listed below.

Paper Guidelines: Review of a Specific Disease

Components:

A. Clinical Features of the Disease

 Age of onset
 Male/ Female predominance
 Clinical symptoms and pathology  Population distribution

B. Genetics/ Transmission

 Spontaneous/ Inherited
 Inheritance distribution
 Identification/ isolation of gene/ loci  Mutation of gene

C. Molecular Pathology

 Effect of mutation on structure/ function of protein
 What/ how pathways are affected
 Effect on development/ function of cells, tissue, and organs  How gene(s) is related to clinical manifestations
 Animal models

Please note that all of the information may not be available or understood for your disease. I expect each of the sections to be addressed in the paper (A., B., & C.), however the subtopics (identified by bullet points) may not be understood. I would like the paper as complete as possible, however the final content will be determined by what is currently known about the disease.

You will accomplish this in three steps. A description of each step and the due date are presented below.

1) Choosing a disease.
Due Date: Sunday March 13, 2016

I want you to identify a human genetic disease and provide a very brief overview of the disease (Section A). I want you state how the disease is inherited (Autosomal dominant, Autosomal recessive,

etc) a brief description of the clinical features and the gene that is mutated (if known). This assignment should be no more than 2 pages and is worth 50 points towards your final grade.

2) Identify an experimental journal article. Due Date: Sunday March 20, 2016

I want you to identify a published research journal article that examines the genetic disease that you have chosen. The paper must have been published within the last two years. The paper must present experimental evidence that is relevant to your disease. I want you to submit the paper to me as well as write a one page summary of what was learned by the research study and how it applies to the understanding of the molecular pathology of the disease (Section C.). You can search for a journal article using the resources of the library. I would also like you to choose one experiment (figure) in the paper and describe what experimental techniques were used for that part of the study. This section should not exceed 1 page. This is worth 50 points towards your grade.