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9 Aug 2018

1 . What effect does the sigma factors have on how the RNA polymerase birds to DNA ?

2. How does the sequence information of a promoter differ from that of the expressed region?

3. Explain how the informational change in sigma factor regulates its ability to bind DNA?

4.What information about the interaction between a protein and DNA does a DNA footprint convey?

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Sixta KovacekLv2

11 Aug 2018

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Related questions

Please provide brief (one sentence) answers:

a) The Mycoplasma chromosome codes for 500 genes, yet it has about 20 promoters. Provide a brief explanation for how this is possible.

b) How many seconds would it take the bacterial RNA polymerase to synthesize an mRNA of 5,000 bases?

c) How many mistakes would the bacterial RNA polymerase make while synthesizing an mRNA of 30,000 bases?

d) Sigma (?) protein by itself does not bind to promoter sites. Predict the effect on transcription of a mutation enabling ? to bind tightly to the â35 region in the absence of other subunits of RNA polymerase.

e) What is the structure of the most common transcription terminator signal in E. coli, and what are 2 conserved features of the RNA sequence of this structure?

f) Why is RNA synthesis not as carefully monitored for errors, as is DNA synthesis?

ivorysea-lion342

Which type of RNA is unique to eukaryotes?

		mRNA
		rRNA
		tRNA
		snRNA
		Its a trick, all cells have all four types of RNA.

1 points

QUESTION 2

The region of DNA to which RNA polymerase binds to initiate transcription is the:

		origin
		promoter
		enhancer
		none of the above are correct

1 points

QUESTION 3

Holoenzyme:

		is RNA polymerase core enzyme.
		is sigma factor.
		is core plus sigma factor.
		none of the above are correct.

1 points

QUESTION 4

Which of these is formed FIRST when RNA polymerase binds to a promoter?

		The closed promoter complex
		The open promoter complex
		A rho-independent terminator
		none of the above are correct.

1 points

QUESTION 5

A hairpin loop followed by a run of Us:

		is the sequence formed in the sense strand of a gene using a rho-independent terminator.
		is the sequence recognized by the rho protein.
		is the structure formed in RNA that causes rho-independent termination.
		is formed immediately after the open promoter complex is formed.

1 points

QUESTION 6

RNA polymerase:

		reads the template strand of the DNA in the 3' to 5' direction.
		synthesizes the RNA in the 5' to 3' direction.
		can begin transcription without a primer.
		all of the above are correct.

1 points

QUESTION 7

Which of the following statements is FALSE?

		Bacteria like E. coli have only one type of sigma factor.
		RNA polymerase has no proofreading activity.
		The promoter of a gene is upstream of the RNA-coding region.
		Bacterial transcriptional terminators are copied into RNA to cause termination.

1 points

QUESTION 8

If the template strand of a gene has the sequence 5' ATGCGAT 3', then:

		the RNA produced will have the sequence 5' AUGCGAU 3'.
		the RNA produced will have the sequence 5' UAGCGUA 3'.
		the RNA produced will have the sequence 5' AUCGCAU 3'.
		None of the above are correct.

1 points

QUESTION 9

The sense strand:

		is the lagging strand
		is also the template strand.
		always goes left to right.
		none of the above are correct.

1 points

QUESTION 10

Which of these is transcribed but not translated?

		mRNA
		tRNA
		rRNA
		all of the above
		tRNA and rRNA are transcribed but not translated.

please help i am a bit confused

1. Bacterial transcription termination VS. Eukaryotic transcription initiation

a. What is required for Rho-independent termination? How does each sequence feature contribute to the mechanism of termination?

b. What is required for Rho-dependent termination?

c. How does Rho differ from other helicases we discussed in Chapter 28? How is it similar?

d. Do you understand the difference between core promoter elements and regulatory elements? Do you understand the difference between core transcription factors and regulatory transcription factors?

e. What are the major features of the TATA-binding protein-DNA interaction? How does this interaction lead to dsDNA destabilization?