BCHM-3050 Lecture Notes - Lecture 3: Random Coil, Streptococcus Pneumoniae, Semiconservative Replication

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Chapter 4: Nucleic Acids

Nucleobases of RNA

Cytosine (C)

Guanine (G)

Adenine (A)

Uracil (U)

Nucleobases of DNA

Cytosine (C)

Adenine (A)

Guanine (G)

Thymine (T)

Nucleic Acid Monomers - Sugar

Ribose is a pentose that forms a heterocyclic ring but has more than just the carbons on

the ring, there is also an oxygen.

Deoxyribose is virtually identical, but there is no OH on the 2’ carbon position.

Nucleic Acid Monomers – Nucleobase

A nucleobase is attached to the #1 carbon position of every ribose/deoxyribose sugar in a

nucleic acid.

oPurine =7 carbons & 2 rings

oPyrimidines = 6 carbons and 1 ring

Each base is formed from either a pruine or a pyrimidine, and is heterocyclic, aromatic,

and planar.

Adenine

Used as an energy currency for ATP & NAD(P)H and FADH2.

Guanine

The 6’ carbon is a carbonyl group and the 2’ carbon is an amino group, and they each

have 3 H+ bonds.

Thymine

Thymine dimers are caused by exposure to UV light and are responsible for skin cancers

Uracil

Primary function is to replace thymine in RNA

Cytosine

Capable of making 3 H+ bonds

Methylation at the 5’ carbon – could play a role in transcriptional regulation

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Document Summary

Ribose is a pentose that forms a heterocyclic ring but has more than just the carbons on the ring, there is also an oxygen. Deoxyribose is virtually identical, but there is no oh on the 2" carbon position. A nucleobase is attached to the #1 carbon position of every ribose/deoxyribose sugar in a nucleic acid: purine =7 carbons & 2 rings, pyrimidines = 6 carbons and 1 ring. Each base is formed from either a pruine or a pyrimidine, and is heterocyclic, aromatic, and planar. Used as an energy currency for atp & nad(p)h and fadh2. The 6" carbon is a carbonyl group and the 2" carbon is an amino group, and they each have 3 h+ bonds. Thymine dimers are caused by exposure to uv light and are responsible for skin cancers. Primary function is to replace thymine in rna. Methylation at the 5" carbon could play a role in transcriptional regulation.

Related Questions

1. Unlike DNA, RNA contains

deoxyribose

a double strand

phosphates

uracil

Nucleic acid structure

2. In transcription, uracil will bond with:

thymine

cytosine

adenine

guanine

Transcription

3. The first team of scientist to document the structure of DNA was:

Franklin and Wilkins

Watson and Crick

Pauling and Chargoff

None of the above

DNA structure

4. Organelles that synthesize protein are:

lysosomes

ribosomes

endoplasmic reticulum

golgi bodies

5. Most of the time in a cell's life, it's DNA is in the form of:

Chromatin

Chromatids

Replicated chromosomes

Spindle fibers

6. Uracil is a nitrogen base that pairs with adenine. Using this information, one could conclude that uracil is a:

Purine

Pyrimidine

Neither a purine or pyrimidine

Not enough information

7. a nucleotide does not consist of a:

polymerase

5-carbon sugar

phosphate group

nitrogen base

8. The genetic code in DNA of an individual depends on the sequence (order) of:

nucleotides

purines only

phosphates

sugars

9. Before a cell divides, it must duplicate its DNA in a process known as:

translation

transformation

transcription

replication

10. The basic unit (building block) of a protein is a (an):

carbohydrate

amino acid

lipid

hydrogen bond

11. Unlike DNA, RNA contains:

deoxyribose

a double strand

phosphates

uracil

12. The structure of DNA was first documented in:

1945

1953

1956

1962

13. In DNA replication, the new molecules produced are:

of unequal length

both assembled in the same direction

built with purines as the backbone

assembled in opposite directions

DNA replication

14. The "backbone" of DNA is composed of:

ribose and phosphates

deoxyribose and phosphates

ribose and uracil

deoxyribose and thymine

DNA structure

15. RNA differs from DNA in which of the following ways?

RNA is single-stranded

RNA contains ribose

RNA does not contain thymine

All of the above

DNA structure

16. Which of the following is NOT required for the transcription process itself?

RNA polymerase

DNA

uracil-containing nucleotides

ribosomes

skyhamster121

QUESTION 1. Compared to eukaryotic genomes, only prokaryotic genomes:

A. contain DNA organized by histones.

B. contain usually one, circular chromosome.

C. contain plasmid DNA.

D. have chromosomes contained in a nucleus.

QUESTION 2. Azathioprine is a drug that may be prescribed to transplant recipients to reduce the chance of tissue rejection reactions. In its active state, it acts as a purine analogue, inhibiting DNA biosynthesis. This means that 6-mercaptopurine will be inserted in place of a purine containing nucleotides during DNA replication. Given this drug's mode of action, you would expect it to be incorporated into DNA in place of:

A. nucleotides containing guanine or cytosine.

B. nucleotides containing adenine or thymine.

C nucleotides containing adenine or guanine.

D. nucleotides containing guanine nucleotide or uracil.

QUESTION 3. RNA is distinguished from DNA because only RNA:

A. typically exists as a single-stranded molecule.

B. has a 3' to 5' directionality.

C. is composed of nucleotides that contain the sugar deoxyribose.

D. is composed of nucleotides that contain the nitrogen bases T, C, G, and A.

QUESTION 4. How are RNA nucleotides different from DNA nucleotides? To be marked correct, you'll need to select all true statements, as there may be more than one correct answer.

A. RNA nucleotides do not contain thymine.

B. RNA nucleotides use the sugar ribose, while DNA nucleotides do not.

C. RNA nucleotides lack phosphate.

D. RNA nucleotides incorporate pyrimidine nitrogen bases, while DNA nucleotides only incorporate purine nitrogen bases.

Match each term with its definition. Each term or definition is used only once

- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	right-spiraling common DNA form
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	referencing the opposite orientation of hydrogen-bonded DNA strands
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	viral particle whose natural host is a prokaryote
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	universal holding that the number of purines always equals the number of pyrimidines
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	nucleic acid base sequences able to form a double-stranded structure by virtue of matching base pairs
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	5ââ 3â or 3ââ 5â
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	nuclease able to cleave phosphodiester linkages in the DNA backbone
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	the structure formed by two DNA strands twisted around a common axis in a spiral
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	bacterial cycle of phage- infected cells resulting in cell destruction and viral release
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	main access site for proteins that recognize specific DNA sequences
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	a cytosine modification favoring Z DNA formation
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	nucleic acid monomer consisting of a sugar, a phosphate group, and a nitrogenous base
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	connects two nucleic acid sugar molecules via an ester bond
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	hydrolyzes peptide bonds linking amino acids
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	U or C in RNA
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	a pentose sugar
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	an enzyme that breaks down RNA
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	either of the two nucleotide chains of a double helix
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	a pyrimidine able to hydrogen bond with adenine
- A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T.	a DNA configuration favored by high ionic strength and GC repeats

A.	protease
B.	lysis
C.	double helix
D.	bacteriophage
E.	complementary
F.	Chargaffâs rule
G.	B DNA
H.	major groove
I.	nucelotide
J.	antiparallel
K.	RNAse
L.	directionality
M.	phosphodiester linkage
N.	ribose
O.	Z DNA
P.	pyrimidine
Q.	methylation
R.	DNAse
S.	uracil
T.	strand

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BCHM-3050 Lecture Notes - Lecture 3: Random Coil, Streptococcus Pneumoniae, Semiconservative Replication

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