BSC 1010 Lecture Notes - Lecture 1: Systems Biology, Bioinformatics, Genomics

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15 May 2017

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The process of change that has transformed life on earth from the earliest beginnings to the diversity of organisms living today. Emergent properties new properties that emerge with each step upward in the hierarchy of life systems biology. An approach to studying biology that aims to model the dynamic behavior of whole biological systems. Biosphere, ecosystems, communities, populations, organisms, organs and organ systems, Tissues, cells, organelles, molecules global climate change a change in the world"s climate. A type of cell with a membrane-enclosed nucleus and membrane-enclosed organelles. Organisms with eukaryotic cells (protists, plants, fungi, and animals) are called eukaryotes. A type of cell lacking a membrane-enclosed nucleus and membrane-enclosed organelles; found only in the domains bacteria and archaea. Dna (deoxyribonucleic acid) a complex molecule containing the genetic information that makes up the chromosomes. Genes the units of inheritance that transmit information from parents to offspring gene expression.

Related Questions

It's a quiz for my life science class.

QUESTION 1

Organisms that have descended from the same initial group and have the ability to interbreed belong to the same

	A.	species.
	B.	family.
	C.	class.
	D.	genus.
	E.	order.

5 points

QUESTION 2

The simplest entity that exhibits all of the properties of life is called a(n)

	A.	molecule.
	B.	cell.
	C.	organism.
	D.	tissue.

5 points

QUESTION 3

In populations, adaptation usually arises through

	A.	responsiveness.
	B.	heredity.
	C.	metabolism.
	D.	natural selection.
	E.	development.

5 points

QUESTION 4

Scientists have found that ancient fossils

	A.	are less similar to present-day organisms than more recent fossils.
	B.	are just as similar to present-day organisms as more recent fossils.
	C.	are more similar to present-day organisms than more recent fossils.
	D.	are very similar to present-day organisms.
	E.	bear no resemblance to present-day organisms.

5 points

QUESTION 5

What is the term that describes the study of the relationship between living things and components of their environment?

	A.	herpetology
	B.	analogy
	C.	zoology
	D.	ecology
	E.	ichnology

5 points

QUESTION 6

Characteristics usually associated with life include all of the following except:

	A.	motility.
	B.	a high degree of organization.
	C.	lack of change from generation to generation.
	D.	reproduction.
	E.	responsiveness to stimuli.

5 points

QUESTION 7

The scientific name for the black-footed ferret is Mustela nigripes. The name Mustela indicates the _____________________ to which the organisms belongs.

	A.	phylum
	B.	class
	C.	family
	D.	species
	E.	genus

5 points

QUESTION 8

Which of the following is considered to be the most basic living unit?

	A.	organ system
	B.	molecule
	C.	organelle
	D.	cell
	E.	tissue

5 points

QUESTION 9

Which of the following concepts best describes the wide variety of dog species we observe, ranging from the domesticated golden retriever or the basset hound, to the wild dogs of Africa, to foxes?

	A.	preadaptation
	B.	special creation
	C.	inheritance of acquired characteristics.
	D.	taxonomy
	E.	evolution

5 points

QUESTION 10

If an ecologist is studying the cycling of carbon through a particular environment (which involes the movement of carbon through living things as well as through rock, air, and water), the scientist is studying at what level of ecology?

	A.	organismal
	B.	community
	C.	ecosystem
	D.	population
	E.	biosphere

5 points

QUESTION 11

Which list is organized from smallest to largest level of organization of life?

	A.	organisms, organ systems, organs, tissues, cells, organelles
	B.	organelles, cells, tissues, organs, organ systems, organisms
	C.	organelles, tissues, cells, organ systems, organs, organisms
	D.	tissues, cells, organelles, organs, organ systems, organisms
	E.	cells, tissues, organ systems, organelles, organs, organisms

5 points

QUESTION 12

When examining the hierarchy of life, which of the following terms is most inclusive?

	A.	biosphere
	B.	population
	C.	species
	D.	ecosystem

5 points

QUESTION 13

The units of inheritance are

	A.	evolutions.
	B.	heredities.
	C.	genes
	D.	twins.
	E.	metabolic activities.

5 points

QUESTION 14

Organisms that undergo asexual reproduction

	A.	require another organism to reproduce.
	B.	are usually very complex.
	C.	produce offspring that are different from each other.
	D.	do not require energy to reproduce.
	E.	produce offspring that are identical to each other and to the parent.

5 points

QUESTION 15

All the living organisms in a particular area at a particular time make up a

	A.	biosphere.
	B.	community.
	C.	biosystem.
	D.	population.
	E.	ecosystem.

5 points

QUESTION 16

The first step in the scientific method is to

	A.	identify a problem.
	B.	predict the results of an experiment.
	C.	propose a solution.
	D.	draw a conclusion.
	E.	perform an experiment.

5 points

QUESTION 17

Young multicelled organisms usually start out small, then grow in size, and increase in complexity. This process is called:

	A.	heredity.
	B.	metabolism.
	C.	development.
	D.	evolution.
	E.	heredity.

5 points

QUESTION 18

To maintain order within their cells and organs, all living things must

	A.	carry on metabolism.
	B.	reproduce.
	C.	constantly change.
	D.	be able to move.
	E.	extract energy from sunlight.

5 points

QUESTION 19

Which of the following includes Highest levels of hierarchy?

	A.	family
	B.	phylum
	C.	domain
	D.	kingdom
	E.	order

5 points

QUESTION 20

Fungi are classified into which domain?

	A.	Archaea
	B.	Eukarya
	C.	Bacteria
	D.	Fungi

erinhare264

1. Water's molecular structure of water gives rise to 4 emergent properties that facilitate life on earth. Explain how the molecular structure of water contributes to each of these properties.

Explain why the structure of carbon makes it an excellent backbone for the molecules that compose living organisms.

2. Explain how water is involved in the synthesis and breakdown of biological macromolecules. in your answer, make sure to discuss the reactions that join and break apart monomers and why water is related to these processes.

Saturated and unsaturated fats have different fluidities at room temperature. Explain why this occurs.

Use the structural differences discussed in part 1 to explain why one type of fat can harm the cardiovascular system while the other has little negative effects.

Given that starch and cellulose are both made from the same monomer, why do you think that cellulose is so much more difficult for animal digestive systems to break down?

Most living organisms are extremely sensitive to changes in temperature and pH.

Use your knowledge of protein structure and the bonds involved to explain this sensitivity. make sure to be specific about levels of structure and bonds that are disrupted when temperature or pH change significantly.

Some living organisms such as gut microorganisms able to survive in environments with extreme pHs. What kind of modifications may they have in the amino acid composition of their proteins that facilitate their adaptation to this environment?

3. Explain how the internal structure of a cell isolated from the pancreas differs from that of a muscle cell.,

Compare the structures of animal and plant cells. How are they different? how are they the same?

Edema is a medical condition that results from fluid leaking out of blood vessels into surrounding tissues. using your knowledge of animal cell junctions, hypothesize what type of junction may be malfunctioning in individuals suffering from edema and explain why you believe your hypothesis to be correct.

burgundyplatypus4

I JUST NEED SIMPLE/BASIC ANSWERS NOT LONG ANSWERS

1. Explain how life can be viewed at different levels of biological complexity.

2. Explain how researchers study biology at different levels, ranging from molecules to ecosystems.

3. Distinguish between discovery-based science and hypothesis testing, and describe the steps of the scientific method.

4. Tell whether a given topic or research study is about biology. Tell whether that study is discovery-based or hypothesis testing, or both.

5. If presented with a research study, propose what the Research Question was.

6. If presented with an example, tell whether a statement is a hypothesis, theory or law and why you think so.

Describe the general structure of atoms and their constituent particles.

Relate atomic structure to the periodic table of the elements. List the elements that make up most of the mass of all living organisms.

Explain how a single element may exist in more than one form, called isotopes, and how certain isotopes have importance in human medicine.

Compare and contrast the types of atomic interactions (bonds) that lead to the formation of molecules.

Tell which atoms and how many of each make up a given molecule (formula or diagram).

For a bond in a given molecule, tell whether the bond is covalent, and if it is, tell whether it is polar or nonpolar and why you think so.

Explain the concept of electronegativity and how it contributes to the formation of polar and nonpolar covalent bonds. Tell whether a given atom is electronegative or not, and why you think so. Label partial charges in a polar bond.

Draw five water molecules and label the atoms and bonds within and between the 5 molecules.

Describe how hydrogen bonding determines many properties of water.

List the properties of water that make it a valuable solvent, and distinguish between hydrophilic and hydrophobic substances.

Explain how water has the ability to ionize into hydroxide ions (OH^â) and into hydrogen ions (H⁺), and how the H⁺ concentration is expressed as a solution's pH.

Explain the properties of carbon that make it the chemical basis of all life.

Describe the variety and chemical characteristics of common functional groups of organic compounds.

Diagram how small molecules may be assembled into larger ones by dehydration reactions and how hydrolysis reactions can reverse this process.

List the four major classes of organic molecules and macromolecules found in living organisms

If shown a molecule, tell whether it is organic or not and how you know.

If shown an organic molecule, tell whether it is an amino acid, nucleotide, fatty acid, steroid, monosaccharide or disaccharide and how you know.

Distinguish among different forms of carbohydrate molecules, including monosaccharides, disaccharides, and polysaccharides.

Relate the functions of plant and animal polysaccharides to their structure.

List the several different classes of lipid molecules important in living organisms.

Diagram the structure of a triglyceride and explain how it is affected by the presence of saturated and unsaturated fatty acids. Explain why some fats are solid at room temperature, and others are liquid.

Discuss how fats function as energy-storage molecules.

Apply knowledge of the structure of phospholipids to the formation of cellular membranes.

Describe the chemical nature of steroids and give an example of their biological importance.

Give examples of the general types of functions that are carried out in cells by different types of proteins.

Explain how amino acids are joined to form a polypeptide, and distinguish between a polypeptide and protein.

Describe the levels of protein structure and the factors that determine them. If shown a protein diagram, label parts that represent its levels of structure. Tell what kind of research techniques are used to determine protein structure.

Outline the bonding forces important in determining protein shape and function.

Explain what domains are and their importance in proteins.

Describe the three components of nucleotides.

Distinguish between the structures of DNA and RNA.

Tell how certain bases pair with others in DNA and RNA.

Discuss the 4 major categories of organic macromolecules found in living things, including structure, function and location of each.

Compare and contrast the general structural features of prokaryotic and eukaryotic cells.

Outline the differences in complexity among bacteria, animal, and plant cells.

Describe how a eukaryotic cell can be viewed as four interacting systems: the nucleus, cytosol, endomembrane system, and semiautonomous organelles.

Explain how the proteome underlies the structure and function of cells.

Analyze how cell size and shape affect the surface area/volume ratio.

Identify the location of the cytosol in a eukaryotic cell and list its general functions.

Describe the three types of protein filaments that make up the cytoskeleton. Identify which underlie cilia, flagella, centrioles, the nuclear lamina, and the brush border. Tell which are readily assembled and disassembled. Tell which are involved in various cell shape changes or movements.

Explain how motor proteins interact with microtubules or actin filaments to promote cellular movement.

Describe the structure and organization of the cell nucleus. Describe the structure and function of nuclear pores.

Outline the structures and general functions of the components of the endomembrane system.

Distinguish between the rough endoplasmic reticulum and the smooth endoplasmic reticulum.

Identify three important functions of the plasma membrane.

Tell why mitochondria and chloroplasts are called semi-autonomous organelles.

Discuss the evidence for the endosymbiosis theory.

Outline the structures and general functions of mitochondria and chloroplasts.

Explain how proteins are moved via vesicles through the endomembrane system.

If you are told about the function of a specific protein, tell where and in what type of cell that protein might be found.

Sketch and label a âtypicalâ animal cell and a real animal cell such as a red blood cell or a muscle cell. Tell how it might be different than the âtypicalâ cell in terms of its organelles and shape.

Sketch and label a âtypicalâ plant cell and a real plant cell such as a root or leaf cell. Tell how it might be different than the âtypicalâ cell in terms of its organelles and shape.

Describe the fluid-mosaic model of membrane structure. Tell why membranes are described as âfluid mosaicsâ.

Draw 10 phospholipid molecules as they would be arranged in a bilayer. Label the hydrophobic and hydrophilic parts.

61. Name all the places in a cell where membranes are found.

62. Describe at least three different categories of membrane proteins and tell what they do.

63. Describe what determines how fluid membranes are.

64. Explain how lipids are synthesized at the ER membrane.

65. Explain how transmembrane proteins are inserted into the ER membrane.

66. Compare and contrast diffusion, facilitated diffusion, passive transport, and active transport.

67. Explain the process of osmosis and how it affects cell structure.

68. Outline the functional differences between channels and transporters. Compare and contrast uniporters, symporters, and antiporters.

69. Explain the difference between primary active transport and secondary active transport.

70. Describe the structure and function of the sodium-potassium pump in animal cells and a similar pump in plants and prokaryotes.

71. Describe exocytosis and endocytosis and tell what molecules are moved across the membrane by these.

Discuss membrane transport, including its function and various forms and why all membranes have each form.

73. If a given cellular process is described, tell which form of transport might be involved.

List the different categories of animal tissue, providing general functions and specific examples of each.

Name the various organ systems found in many animals, list the components of each, and describe their general functions.

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BSC 1010 Lecture Notes - Lecture 1: Systems Biology, Bioinformatics, Genomics

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